SMTL ID : 3wex.1 (3 other biounits)

Crystal structure of HLA-DP5 in complex with Cry j 1-derived peptide (residues 214-222)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 5 residues within 4Å: Chain A: V.116, N.118, E.166, H.167, W.168 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.116 Hydrogen bonds: A:N.118, A:W.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kusano, S. et al., Structural basis for the specific recognition of the major antigenic peptide from the Japanese cedar pollen allergen Cry j 1 by HLA-DP5. J. Mol. Biol. (2014)

Release Date

2014-07-23

Peptides

MHC class II antigen: A
MHC class II antigen: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC class II antigen

MHC class II antigen

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