SMTL ID : 3wf5.1

Crystal structure of S6K1 kinase domain in complex with a pyrazolopyrimidine derivative 4-[4-(1H-benzimidazol-2-yl)piperidin-1-yl]-1H-pyrazolo[3,4-d]pyrimidine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.170, H.175, H.181, C.184 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.170, A:H.175, A:H.181, A:C.184

1 x FZ8: 4-[4-(1H-benzimidazol-2-yl)piperidin-1-yl]-1H-pyrazolo[3,4-d]pyrimidine(Non-covalent)

FZ8.2: 14 residues within 4Å: Chain A: L.27, G.28, K.29, G.30, G.33, V.35, A.51, V.86, L.102, E.103, Y.104, L.105, M.155, K.171 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:K.171 Hydrogen bonds: A:E.103, A:L.105 Water bridges: A:L.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Niwa, H. et al., Crystal structures of the S6K1 kinase domain in complexes with inhibitors. J.Struct.Funct.Genom. (2014)

Release Date

2014-08-06

Peptides

Ribosomal protein S6 kinase beta-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosomal protein S6 kinase beta-1

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