SMTL ID : 3wh2.1

Human Mincle in complex with citrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.97, N.99, N.121, D.122 Ligands: FLC.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.97, A:D.122, A:D.122 CA.2: 4 residues within 4Å: Chain A: V.45, N.47, E.51, E.134 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.51, A:E.51, A:E.134, A:E.134, H2O.2

1 x FLC: CITRATE ANION(Non-covalent)

FLC.3: 10 residues within 4Å: Chain A: E.97, N.99, N.100, R.111, N.121, D.122, V.123, T.124, L.127 Ligands: CA.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.121, A:N.121, A:T.124 Water bridges: A:R.111, A:R.111, A:Y.129 Salt bridges: A:R.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furukawa, A. et al., Structural analysis for glycolipid recognition by the C-type lectins Mincle and MCL. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-10-23

Peptides

C-type lectin domain family 4 member E: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C-type lectin domain family 4 member E

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