SMTL ID : 3whb.1

Crystal structure of FadR from Bacillus subtilis, a transcriptional regulator involved in the regulation of fatty acid degradation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

1 x DCC: DODECYL-COA(Non-covalent)

DCC.1: 30 residues within 4Å: Chain A: F.58, K.61, M.62, F.65, H.90, L.93, T.104, R.109, R.116, I.119, N.120, E.121, L.123, K.124, Y.126, L.127, R.150, L.151, R.153, Q.154, F.157, D.161 Chain B: E.162, T.165, T.166, M.169, N.170, K.173, Y.174, L.179 26 PLIP interactions: 17 interactions with chain A, 9 interactions with chain B Hydrophobic interactions: A:F.58, A:K.61, A:F.65, A:L.93, A:I.119, A:L.123, A:K.124, A:Y.126, A:L.127 Hydrogen bonds: A:R.116, A:N.120, A:R.150, A:Q.154, A:Q.154, B:E.162, B:T.166, B:N.170 Water bridges: A:R.153, B:T.166, B:W.167, B:Y.174 Salt bridges: A:R.153, B:K.173 pi-Cation interactions: A:R.150 pi-Stacking: B:Y.174, B:Y.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujihashi, M. et al., Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation. Proteins (2014)

Release Date

2014-03-19

Peptides

Fatty acid metabolism regulator protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fatty acid metabolism regulator protein

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