SMTL ID : 3whj.1 (2 other biounits)

Crystal structure of Nas2 N-terminal domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: D.29, H.97, Q.100, R.101 Ligands: CD.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.97 Salt bridges: A:H.97 SO4.2: 4 residues within 4Å: Chain A: K.40, T.41, E.44 Ligands: CD.5 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.40

5 x CD: CADMIUM ION(Non-covalent)

CD.3: 1 residues within 4Å: Chain A: D.94 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.94, A:D.94, H2O.1 CD.4: 3 residues within 4Å: Chain A: D.29, H.97 Ligands: SO4.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.29, A:D.29, A:H.97 CD.5: 3 residues within 4Å: Chain A: K.40, E.44 Ligands: SO4.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.44, A:E.44, H2O.2 CD.6: 1 residues within 4Å: Chain A: E.7 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.7, A:E.7, H2O.4 CD.7: 1 residues within 4Å: Chain A: D.111 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.111

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Satoh, T. et al., Structural basis for proteasome formation controlled by an assembly chaperone nas2. Structure (2014)

Release Date

2014-03-26

Peptides

Probable 26S proteasome regulatory subunit p27: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Probable 26S proteasome regulatory subunit p27

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