SMTL ID : 3whs.1

Crystal structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x AVN: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID(Covalent)

AVN.1: 12 residues within 4Å: Chain A: R.129 Chain B: T.1, T.19, E.21, E.40, D.43, S.62, S.63, M.64, G.83, G.84, I.87 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:E.21, B:E.40, B:D.43, B:S.63, B:M.64, B:G.83, B:G.84 Water bridges: B:T.1 Salt bridges: A:R.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ida, T. et al., Structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin: diversity of the binding mode of a classical and electrophilic active-site-directed glutamate analogue. Acta Crystallogr.,Sect.D (2014)

Release Date

2014-02-19

Peptides

Gamma-glutamyltranspeptidase large chain: A
Gamma-glutamyltranspeptidase small chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Gamma-glutamyltranspeptidase large chain

Gamma-glutamyltranspeptidase small chain

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