SMTL ID : 3wi5.1

Crystal structure of the Loop 7 mutant PorB from Neisseria meningitidis serogroup B

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-trimer

Ligands

6 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 4 residues within 4Å: Chain A: K.62, R.75, K.98, R.124 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.75 Salt bridges: A:K.62, A:R.75, A:K.98, A:R.124 FLC.2: 2 residues within 4Å: Chain A: K.40, R.75 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.75 Water bridges: A:K.9, A:K.311, A:K.311 Salt bridges: A:K.9, A:K.40, A:K.40, A:K.311 FLC.3: 4 residues within 4Å: Chain B: K.62, R.75, K.98, R.124 5 PLIP interactions: 5 interactions with chain B Water bridges: B:R.75 Salt bridges: B:K.62, B:R.75, B:K.98, B:R.124 FLC.4: 2 residues within 4Å: Chain B: K.40, R.75 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.75 Water bridges: B:K.9, B:K.311, B:K.311 Salt bridges: B:K.9, B:K.40, B:K.40, B:K.311 FLC.5: 4 residues within 4Å: Chain C: K.62, R.75, K.98, R.124 5 PLIP interactions: 5 interactions with chain C Water bridges: C:R.75 Salt bridges: C:K.62, C:R.75, C:K.98, C:R.124 FLC.6: 2 residues within 4Å: Chain C: K.40, R.75 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:R.75 Water bridges: C:K.9, C:K.311, C:K.311 Salt bridges: C:K.9, C:K.40, C:K.40, C:K.311

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kattner, C. et al., Crystallographic analysis of Neisseria meningitidis PorB extracellular loops potentially implicated in TLR2 recognition. J.Struct.Biol. (2014)

Release Date

2014-01-01

Peptides

Major outer membrane protein P.IB: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
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Major outer membrane protein P.IB