- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x BGC: beta-D-glucopyranose(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 3 residues within 4Å:- Chain A: S.251, R.252, H.324
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.252
- Water bridges: A:Y.196, A:R.252, A:H.324, A:H.324
GOL.8: 8 residues within 4Å:- Chain B: D.291, V.292, N.294, D.296, F.716, S.717, D.726, R.739
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:V.292, B:D.296, B:D.726, B:R.739
- Water bridges: B:F.716, B:S.717, B:D.726
GOL.9: 7 residues within 4Å:- Chain B: I.347, P.351, Y.430, N.434, Y.605, L.606, Q.684
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:N.434, B:Y.605
GOL.10: 6 residues within 4Å:- Chain A: R.75, Y.77, F.82
- Chain B: K.163, D.164, R.169
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:R.75, A:Y.77, A:Y.77, B:D.164, B:R.169
GOL.11: 2 residues within 4Å:- Chain A: F.218
- Chain B: N.167
4 PLIP interactions:3 interactions with chain A, 1 interactions with chain B- Water bridges: A:N.216, A:K.220, A:K.220
- Hydrogen bonds: B:N.167
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 6 residues within 4Å:- Chain A: Y.337, S.631, S.632, L.633, H.675
- Ligands: BGC.1
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:Y.337, A:Y.337, A:S.632, A:S.632
- Water bridges: A:K.330, A:K.330, A:K.330, A:N.669
- Salt bridges: A:K.330
PO4.5: 2 residues within 4Å:- Chain A: Y.224
- Chain B: Y.224
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:Y.224, B:Y.224, A:Y.224
- Water bridges: B:I.175
PO4.12: 6 residues within 4Å:- Chain B: Y.337, S.631, S.632, L.633, H.675
- Ligands: BGC.6
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:S.632
- Water bridges: B:K.330, B:K.330, B:Y.337, B:K.596, B:S.632, B:N.669, B:N.669, B:H.675
- Salt bridges: B:K.330
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Okada, S. et al., Structural and mutational analysis of substrate recognition in kojibiose phosphorylase. Febs J. (2014)
- Release Date
- 2014-02-05
- Peptides
- Kojibiose phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x BGC: beta-D-glucopyranose(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Okada, S. et al., Structural and mutational analysis of substrate recognition in kojibiose phosphorylase. Febs J. (2014)
- Release Date
- 2014-02-05
- Peptides
- Kojibiose phosphorylase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D