SMTL ID : 3wj4.1

Crystal structure of PPARgamma ligand binding domain in complex with tributyltin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-dimer

Ligands

2 x TBY: tributylstannanyl(Non-covalent)

TBY.1: 10 residues within 4Å: Chain A: I.80, F.81, C.84, Y.126, V.138, I.140, F.159, F.162, M.163, H.248 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.80, A:F.81, A:Y.126, A:Y.126, A:V.138, A:I.140, A:F.162 TBY.2: 7 residues within 4Å: Chain B: C.84, Y.126, V.138, L.152, F.162, M.163, H.248 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:Y.126, B:V.138, B:L.152, B:L.152, B:F.162, B:F.162, B:M.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harada, S. et al., Structural basis for PPARgamma transactivation by endocrine disrupting organotin compounds. To be Published

Release Date

2014-10-15

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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