SMTL ID : 3wj5.1

Crystal structure of PPARgamma ligand binding domain in complex with triphenyltin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

homo-dimer

Ligands

2 x T9T: triphenylstannanyl(Non-covalent)

T9T.1: 16 residues within 4Å: Chain A: I.80, F.81, C.84, Q.85, S.88, I.125, Y.126, L.129, F.159, F.162, M.163, K.166, H.248, L.252, L.268, Y.272 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:I.80, A:F.81, A:F.81, A:Q.85, A:I.125, A:Y.126, A:L.129, A:F.159, A:F.162, A:F.162, A:L.252, A:L.268, A:Y.272 pi-Cation interactions: A:H.248 T9T.2: 10 residues within 4Å: Chain B: C.84, R.87, S.88, I.125, L.129, M.133, V.138, I.140, M.147, M.163 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:R.87, B:R.87, B:I.125, B:L.129, B:V.138, B:I.140, B:M.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Harada, S. et al., Structural basis for PPARgamma transactivation by endocrine disrupting organotin compounds. To be Published

Release Date

2014-10-15

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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