SMTL ID : 3wj8.1 (2 other biounits)

Crystal Structure of DL-2-haloacid dehalogenase mutant with 2-bromo-2-methylpropionate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x B2P: 2-bromo-2-methylpropanoic acid(Non-covalent)

B2P.1: 10 residues within 4Å: Chain A: W.37, A.39, F.40, G.41, A.192, S.193, N.194, Y.270, F.273, I.274 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.39, A:F.273 Hydrogen bonds: A:F.40, A:S.193, A:N.194 B2P.3: 10 residues within 4Å: Chain B: W.37, A.39, F.40, G.41, A.192, S.193, N.194, Y.270, F.273, I.274 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:A.39, B:F.273 Hydrogen bonds: B:F.40, B:S.193, B:S.193, B:N.194, B:N.194

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: R.210, P.215 No protein-ligand interaction detected (PLIP) GOL.4: 2 residues within 4Å: Chain B: R.210, P.215 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.210 Water bridges: B:R.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siwek, A. et al., Binding modes of DL-2-haloacid dehalogenase revealed by crystallography, modeling and isotope effects studies. Arch.Biochem.Biophys. (2013)

Release Date

2013-11-27

Peptides

DL-2-haloacid dehalogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DL-2-haloacid dehalogenase

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