SMTL ID : 3wmz.1

Crystal Structure of Streptomyces coelicolor alpha-L-arabinofuranosidase ethylmercury derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: Q.273, Q.327, H.390 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.390, H2O.3, H2O.3, H2O.3, H2O.3

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.2: 10 residues within 4Å: Chain A: K.164, D.165, Y.187, Q.232, I.271, D.272, E.324, H.390, Y.424 Ligands: EMC.5 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.164, A:Q.232, A:E.324, A:Y.424 Water bridges: A:R.349, A:Q.414

3 x EMC: ETHYL MERCURY ION(Non-covalent)

EMC.3: 4 residues within 4Å: Chain A: H.175, T.196, N.197, W.198 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.175 EMC.4: 2 residues within 4Å: Chain A: H.171, N.172 No protein-ligand interaction detected (PLIP) EMC.5: 5 residues within 4Å: Chain A: D.165, D.272, E.324, H.390 Ligands: TRS.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.272, A:E.324

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maehara, T. et al., Crystal structure and characterization of the glycoside hydrolase family 62 alpha-L-arabinofuranosidase from Streptomyces coelicolor. J.Biol.Chem. (2014)

Release Date

2014-02-05

Peptides

Extracellular exo-alpha-L-arabinofuranosidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Extracellular exo-alpha-L-arabinofuranosidase

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