SMTL ID : 3wr5.1 (1 other biounit)

Structural basis on the efficient CO2 reduction of acidophilic formate dehydrogenase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

homo-dimer

Ligands

2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 28 residues within 4Å: Chain A: F.104, I.128, N.152, S.153, V.156, A.204, G.206, R.207, I.208, D.227, R.228, H.229, N.260, V.261, P.262, H.264, E.266, T.267, T.288, A.289, R.290, D.314, V.315, H.338, S.340, G.341, S.386, Y.387 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:I.128, A:V.156, A:I.208 Hydrogen bonds: A:R.207, A:I.208, A:R.228, A:H.229, A:E.266, A:T.288, A:G.341, A:S.386 Water bridges: A:S.153, A:S.153, A:G.206, A:G.209, A:R.228, A:R.247, A:R.247, A:L.263, A:L.263, A:R.290, A:H.385 Salt bridges: A:R.207 NAD.2: 28 residues within 4Å: Chain B: F.104, I.128, N.152, S.153, V.156, A.204, G.206, R.207, I.208, D.227, R.228, H.229, N.260, V.261, P.262, H.264, E.266, T.267, T.288, A.289, R.290, D.314, V.315, H.338, S.340, G.341, S.386, Y.387 23 PLIP interactions: 23 interactions with chain B Hydrophobic interactions: B:I.128, B:V.156, B:I.208 Hydrogen bonds: B:R.207, B:I.208, B:R.228, B:H.264, B:E.266, B:T.288, B:G.341, B:S.386 Water bridges: B:G.206, B:R.207, B:G.209, B:R.228, B:R.247, B:R.247, B:R.290, B:H.385, B:H.385, B:Y.387, B:Y.387 Salt bridges: B:R.207

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ha, J.M. et al., Structural basis on the efficient CO2 reduction of acidophilic formate dehydrogenase. To be Published

Release Date

2015-02-25

Peptides

Formate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Formate dehydrogenase

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