- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.07 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 4 x NES: 2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID(Non-covalent)
NES.2: 10 residues within 4Å:- Chain A: W.123, D.124, W.148, V.152, S.153, H.156, T.173, R.199, H.249
- Ligands: NAP.1
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.94, A:D.124, A:V.152
- Water bridges: A:Q.154
- Salt bridges: A:H.156, A:R.199, A:H.249
NES.3: 7 residues within 4Å:- Chain A: R.36, V.53, D.54, E.78, Q.79, Y.82, F.83
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.54, A:Q.79
NES.5: 11 residues within 4Å:- Chain B: D.94, W.123, D.124, W.148, V.152, S.153, H.156, T.173, R.199, H.249
- Ligands: NAP.4
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:D.94, B:D.94, B:D.124, B:V.152
- Water bridges: B:Q.154, B:N.276
- Salt bridges: B:H.156, B:R.199, B:H.249
NES.6: 7 residues within 4Å:- Chain B: R.36, V.53, D.54, E.78, Q.79, Y.82, F.83
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:D.54, B:D.54, B:Q.79
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Akita, H. et al., Structural insight into the thermostable NADP(+)-dependent meso-diaminopimelate dehydrogenase from Ureibacillus thermosphaericus. Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2015-05-06
- Peptides
- Meso-diaminopimelate D-dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.07 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 4 x NES: 2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Akita, H. et al., Structural insight into the thermostable NADP(+)-dependent meso-diaminopimelate dehydrogenase from Ureibacillus thermosphaericus. Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2015-05-06
- Peptides
- Meso-diaminopimelate D-dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B