SMTL ID : 3x0e.1

Crystal structure of the ectodomain of human CD81 large extracellular loop (hCD81-LEL)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.84 Å

Oligo State

homo-dimer

Ligands

5 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 5 residues within 4Å: Chain A: Q.24, A.31, N.32, N.33, A.34 No protein-ligand interaction detected (PLIP) MG.2: 2 residues within 4Å: Chain A: E.43, T.44 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain A: N.33, A.34, V.37 No protein-ligand interaction detected (PLIP) MG.4: 3 residues within 4Å: Chain A: T.40 Chain B: D.87, K.92 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:K.92 MG.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, W. et al., An intramolecular bond at cluster of differentiation 81 ectodomain is important for hepatitis C virus entry. Faseb J. (2015)

Release Date

2015-07-01

Peptides

CD81 antigen: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

CD81 antigen