SMTL ID : 3x33.1

Crystal structure of the oxidized form of the solubilized domain of porcine cytochrome b5 in form 2 crystal

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 0.93 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 20 residues within 4Å: Chain A: L.28, L.30, Y.35, L.37, F.40, H.44, P.45, G.46, V.50, L.51, Q.54, A.59, N.62, F.63, V.66, H.68, S.69, A.72, L.75, S.76 19 PLIP interactions: 19 interactions with chain A, Hydrophobic interactions: A:L.30, A:L.37, A:F.40, A:P.45, A:P.45, A:V.50, A:L.51, A:Q.54, A:A.59, A:N.62, A:F.63, A:F.63, A:V.66, A:A.72, A:L.75 Hydrogen bonds: A:S.69 Water bridges: A:S.69 Metal complexes: A:H.44, A:H.68

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: K.24, S.25, W.27, D.36, T.38 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.38 Water bridges: A:S.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hirano, Y. et al., High-resolution crystal structures of the solubilized domain of porcine cytochrome b5. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-07-15

Peptides

Cytochrome b5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cytochrome b5

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