SMTL ID : 3x39.2 (1 other biounit)

Domain-swapped dimer of Pseudomonas aeruginosa cytochrome c551

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x HEC: HEME C(Non-covalent)

HEC.1: 25 residues within 4Å: Chain A: G.11, C.12, C.15, H.16 Chain B: V.23, G.24, P.25, Y.27, V.30, F.34, L.44, R.47, I.48, S.52, Q.53, G.54, V.55, W.56, G.57, I.59, P.60, M.61, N.64, L.74, V.78 18 PLIP interactions: 17 interactions with chain B, 1 interactions with chain A, Hydrophobic interactions: B:P.25, B:Y.27, B:V.30, B:I.48, B:I.48, B:I.59, B:M.61, B:N.64, B:L.74, B:V.78 Hydrogen bonds: B:G.54, B:V.55, B:W.56, B:G.57 Water bridges: B:S.52 Salt bridges: B:K.33, B:R.47 Metal complexes: A:H.16 HEC.2: 25 residues within 4Å: Chain A: V.23, G.24, P.25, Y.27, V.30, F.34, L.44, R.47, I.48, S.52, Q.53, G.54, V.55, W.56, G.57, I.59, P.60, M.61, N.64, L.74, V.78 Chain B: G.11, C.12, C.15, H.16 18 PLIP interactions: 17 interactions with chain A, 1 interactions with chain B, Hydrophobic interactions: A:P.25, A:Y.27, A:V.30, A:I.48, A:I.48, A:I.59, A:M.61, A:N.64, A:L.74, A:V.78 Hydrogen bonds: A:G.54, A:V.55, A:W.56, A:G.57 Water bridges: A:S.52 Salt bridges: A:K.33, A:R.47 Metal complexes: B:H.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagao, S. et al., Domain-Swapped Dimer of Pseudomonas aeruginosa Cytochrome c551: Structural Insights into Domain Swapping of Cytochrome c Family Proteins. Plos One (2015)

Release Date

2015-04-22

Peptides

Cytochrome c-551: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Cytochrome c-551

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