- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE(Non-covalent)
- 6 x NI: NICKEL (II) ION(Non-covalent)
NI.2: 3 residues within 4Å:- Chain A: H.106, H.130, R.141
No protein-ligand interaction detected (PLIP)NI.3: 5 residues within 4Å:- Chain A: D.129
- Chain B: D.129
- Chain C: D.129
- Ligands: NI.7, NI.11
6 PLIP interactions:1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: B:D.129, A:D.129, C:D.129, H2O.1, H2O.2, H2O.3
NI.6: 3 residues within 4Å:- Chain B: H.106, H.130, R.141
No protein-ligand interaction detected (PLIP)NI.7: 5 residues within 4Å:- Chain A: D.129
- Chain B: D.129
- Chain C: D.129
- Ligands: NI.3, NI.11
6 PLIP interactions:1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: B:D.129, A:D.129, C:D.129, H2O.1, H2O.2, H2O.3
NI.10: 3 residues within 4Å:- Chain C: H.106, H.130, R.141
No protein-ligand interaction detected (PLIP)NI.11: 5 residues within 4Å:- Chain A: D.129
- Chain B: D.129
- Chain C: D.129
- Ligands: NI.3, NI.7
6 PLIP interactions:1 interactions with chain B, 1 interactions with chain A, 1 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: B:D.129, A:D.129, C:D.129, H2O.1, H2O.2, H2O.3
- 3 x MG: MAGNESIUM ION(Non-covalent)
MG.4: 3 residues within 4Å:- Chain B: D.62, R.98
- Ligands: DUP.1
No protein-ligand interaction detected (PLIP)MG.8: 3 residues within 4Å:- Chain C: D.62, R.98
- Ligands: DUP.5
No protein-ligand interaction detected (PLIP)MG.12: 3 residues within 4Å:- Chain A: D.62, R.98
- Ligands: DUP.9
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tormo-Mas, M.A. et al., Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. Mol.Cell (2013)
- Release Date
- 2013-01-30
- Peptides
- DUTPASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.20 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x DUP: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE(Non-covalent)
- 6 x NI: NICKEL (II) ION(Non-covalent)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tormo-Mas, M.A. et al., Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. Mol.Cell (2013)
- Release Date
- 2013-01-30
- Peptides
- DUTPASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A