- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x NI: NICKEL (II) ION(Non-covalent)(Non-functional Binders)
- 3 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)
UMP.2: 15 residues within 4Å:- Chain A: L.95, G.112, K.113, I.114, A.115, Y.118, N.121, L.122, G.123, N.125
- Chain B: G.198, F.199
- Chain C: R.98, S.99, Q.171
20 PLIP interactions:12 interactions with chain A, 3 interactions with chain B, 5 interactions with chain C- Hydrophobic interactions: A:I.114, A:Y.118
- Hydrogen bonds: A:K.113, A:A.115, A:Y.118, A:G.123, A:G.123, A:N.125, C:S.99, C:S.99, C:Q.171
- Water bridges: A:G.112, A:K.113, A:K.113, A:N.125, B:G.198, B:S.201, C:R.98, C:G.100
- pi-Stacking: B:F.199
UMP.5: 15 residues within 4Å:- Chain A: R.98, S.99, Q.171
- Chain B: L.95, G.112, K.113, I.114, A.115, Y.118, N.121, L.122, G.123, N.125
- Chain C: G.198, F.199
19 PLIP interactions:11 interactions with chain B, 2 interactions with chain C, 6 interactions with chain A- Hydrophobic interactions: B:I.114, B:Y.118
- Hydrogen bonds: B:K.113, B:A.115, B:G.123, B:G.123, B:N.125, A:S.99, A:S.99, A:Q.171
- Water bridges: B:G.112, B:K.113, B:K.113, B:N.125, C:G.198, A:R.98, A:S.99, A:G.100
- pi-Stacking: C:F.199
UMP.8: 15 residues within 4Å:- Chain A: G.198, F.199
- Chain B: R.98, S.99, Q.171
- Chain C: L.95, G.112, K.113, I.114, A.115, Y.118, N.121, L.122, G.123, N.125
19 PLIP interactions:11 interactions with chain C, 5 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: C:I.114, C:Y.118
- Hydrogen bonds: C:K.113, C:A.115, C:G.123, C:G.123, C:N.125, B:S.99, B:S.99, B:Q.171
- Water bridges: C:G.112, C:K.113, C:K.113, C:N.125, B:R.98, B:G.100, A:G.198, A:S.201
- pi-Stacking: A:F.199
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tormo-Mas, M.A. et al., Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. Mol.Cell (2013)
- Release Date
- 2013-01-30
- Peptides
- DUTPASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x NI: NICKEL (II) ION(Non-covalent)(Non-functional Binders)
- 3 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Tormo-Mas, M.A. et al., Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism. Mol.Cell (2013)
- Release Date
- 2013-01-30
- Peptides
- DUTPASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A