SMTL ID : 3zge.2 (2 other biounits)

Greater efficiency of photosynthetic carbon fixation due to single amino acid substitution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.49 Å

Oligo State

homo-dimer

Ligands

2 x ASP: ASPARTIC ACID(Non-covalent)

ASP.1: 8 residues within 4Å: Chain A: R.665, Q.697, M.849, K.853, L.905, R.912, Q.987, N.988 10 PLIP interactions: 8 interactions with chain A, 2 Ligand-Ligand interactions Hydrogen bonds: A:Q.697, A:Q.697, A:N.988, A:N.988, A:N.988, D.1, D.1 Salt bridges: A:R.665, A:K.853, A:R.912 ASP.4: 8 residues within 4Å: Chain B: R.665, Q.697, M.849, K.853, L.905, R.912, Q.987, N.988 10 PLIP interactions: 8 interactions with chain B, 2 Ligand-Ligand interactions Hydrogen bonds: B:Q.697, B:Q.697, B:N.988, B:N.988, B:N.988, D.4, D.4 Salt bridges: B:R.665, B:K.853, B:R.912

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.202, R.203, S.204 Chain B: R.390 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.204 Salt bridges: A:R.202, A:R.203, B:R.390 SO4.5: 4 residues within 4Å: Chain A: R.390 Chain B: R.202, R.203, S.204 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:S.204 Salt bridges: B:R.202, B:R.203, A:R.390

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 9 residues within 4Å: Chain A: G.660, G.661, G.664, R.665, Q.691, L.846, N.988, T.989, G.990 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.660, A:Q.691, A:N.988, A:T.989, A:G.990 Water bridges: A:G.990 EDO.6: 9 residues within 4Å: Chain B: G.660, G.661, G.664, R.665, Q.691, L.846, N.988, T.989, G.990 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.660, B:Q.691, B:N.988, B:T.989, B:G.990 Water bridges: B:G.990

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paulus, J.K. et al., Greater Efficiency of Photosynthetic Carbon Fixation due to Single Amino Acid Substitution. Nat.Commun. (2013)

Release Date

2013-02-27

Peptides

C4 PHOSPHOENOLPYRUVATE CARBOXYLASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C4 PHOSPHOENOLPYRUVATE CARBOXYLASE

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