SMTL ID : 3zgn.2 (1 other biounit)

Crystal structures of Escherichia coli IspH in complex with TMBPP a potent inhibitor of the methylerythritol phosphate pathway

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 7 residues within 4Å: Chain A: C.28, G.30, C.112, L.114, T.183, C.213 Ligands: 10G.2 3 PLIP interactions: 3 interactions with chain A, Metal complexes: A:C.28, A:C.112, A:C.213

1 x 10G: (2E)-3-methyl-4-sulfanylbut-2-en-1-yl trihydrogen diphosphate(Non-covalent)

10G.2: 16 residues within 4Å: Chain A: V.31, V.56, H.57, A.89, H.90, V.115, H.140, E.142, T.183, T.184, N.240, S.241, S.242, N.243, S.285 Ligands: SF4.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:A.89 Hydrogen bonds: A:H.57, A:H.57, A:T.184, A:T.184, A:S.242, A:N.243, A:N.243, A:S.285 Salt bridges: A:H.57, A:H.57, A:H.90, A:H.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Borel, F. et al., Further Insight into Crystal Structures of Escherichia coli IspH/LytB in Complex with Two Potent Inhibitors of the MEP Pathway: A Starting Point for Rational Design of New Antimicrobials. Chembiochem (2017)

Release Date

2013-01-09

Peptides

4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE

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