- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x CYN: CYANIDE ION(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 6 residues within 4Å:- Chain A: N.82, K.84, D.129, N.130, V.131, E.132
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.82, A:E.132
- Water bridges: A:K.84, A:K.84, A:N.130
GOL.4: 1 residues within 4Å:- Chain A: P.164
No protein-ligand interaction detected (PLIP)GOL.8: 4 residues within 4Å:- Chain A: D.24, L.27
- Chain B: Y.73, R.140
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.24
GOL.9: 7 residues within 4Å:- Chain B: K.29, F.34, E.39, R.103, S.104, Y.105
- Ligands: GOL.10
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:K.29, B:Y.105
- Water bridges: B:E.39
GOL.10: 10 residues within 4Å:- Chain B: E.39, I.42, Q.43, T.100, S.101, N.102, R.103, S.104, Y.105
- Ligands: GOL.9
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:E.39
- 1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pesce, A. et al., Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin. Plos One (2013)
- Release Date
- 2013-06-26
- Peptides
- PROTOGLOBIN: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
- 2 x CYN: CYANIDE ION(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pesce, A. et al., Structure and Haem-Distal Site Plasticity in Methanosarcina Acetivorans Protoglobin. Plos One (2013)
- Release Date
- 2013-06-26
- Peptides
- PROTOGLOBIN: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B