SMTL ID : 3znx.1

Crystal structure of the OTU domain of OTULIN D336A mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 1 residues within 4Å: Chain A: E.132 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.132, H2O.8, H2O.9

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: K.17 Ligand excluded by PLIP

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: W.90, D.191, P.192, G.193, Q.194, R.197 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.193, A:Q.194, A:R.197, A:R.197 Water bridges: A:W.90, A:Q.93, A:D.191, A:D.191 GOL.4: 5 residues within 4Å: Chain A: L.80, L.158, N.161, R.162, E.165 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.161, A:R.162 GOL.5: 7 residues within 4Å: Chain A: H.199, Q.202, V.203, G.207, G.208, E.210, E.213 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.207, A:E.213 Water bridges: A:G.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Keusekotten, K. et al., Otulin Antagonizes Lubac Signaling by Specifically Hydrolyzing met1-Linked Polyubiquitin. Cell(Cambridge,Mass.) (2013)

Release Date

2013-06-26

Peptides

PROTEIN FAM105B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN FAM105B