SMTL ID : 3zr5.1

STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 3 residues within 4Å: Chain A: R.25, I.269, N.272 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 5 residues within 4Å: Chain A: D.347, L.349, G.350, N.351, L.441 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 7 residues within 4Å: Chain A: T.529, N.530, K.608, G.609, Y.629, A.655, R.656 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 2 residues within 4Å: Chain A: Y.373, N.375 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.373, A:N.375

1 x CA: CALCIUM ION(Non-covalent)

CA.5: 4 residues within 4Å: Chain A: D.465, N.467, F.499, D.648 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.465, A:F.499, A:D.648, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deane, J.E. et al., Insights Into Krabbe Disease from Structures of Galactocerebrosidase. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-09-28

Peptides

GALACTOCEREBROSIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

GALACTOCEREBROSIDASE

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