SMTL ID : 3zrh.1

Crystal structure of the Lys29, Lys33-linkage-specific TRABID OTU deubiquitinase domain reveals an Ankyrin-repeat ubiquitin binding domain (AnkUBD)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

monomer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: K.18, W.21 No protein-ligand interaction detected (PLIP) EDO.2: 5 residues within 4Å: Chain A: K.98, L.160, D.161, R.162, W.193 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.98, A:R.162, A:W.193

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 1 residues within 4Å: Chain A: W.264 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Licchesi, J.D.F. et al., An Ankyrin-Repeat Ubiquitin-Binding Domain Determines Trabid'S Specificity for Atypical Ubiquitin Chains. Nat.Struct.Mol.Biol. (2011)

Release Date

2011-12-14

Peptides

UBIQUITIN THIOESTERASE ZRANB1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UBIQUITIN THIOESTERASE ZRANB1