- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x ADA- ADA- AQA: 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 3 residues within 4Å:- Chain A: L.261, R.264, E.291
No protein-ligand interaction detected (PLIP)GOL.3: 3 residues within 4Å:- Chain A: P.175, M.235, V.269
No protein-ligand interaction detected (PLIP)GOL.6: 3 residues within 4Å:- Chain B: L.261, R.264, E.291
No protein-ligand interaction detected (PLIP)GOL.7: 3 residues within 4Å:- Chain B: P.175, M.235, V.269
No protein-ligand interaction detected (PLIP)GOL.10: 3 residues within 4Å:- Chain C: L.261, R.264, E.291
No protein-ligand interaction detected (PLIP)GOL.11: 3 residues within 4Å:- Chain C: P.175, M.235, V.269
No protein-ligand interaction detected (PLIP)- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 5 residues within 4Å:- Chain A: H.99, T.133, V.135, K.157, V.159
7 PLIP interactions:7 interactions with chain A- Water bridges: A:T.133, A:T.133, A:T.133, A:T.133, A:K.157
- Salt bridges: A:H.99, A:K.157
PO4.8: 5 residues within 4Å:- Chain B: H.99, T.133, V.135, K.157, V.159
7 PLIP interactions:7 interactions with chain B- Water bridges: B:T.133, B:T.133, B:T.133, B:T.133, B:K.157
- Salt bridges: B:H.99, B:K.157
PO4.12: 5 residues within 4Å:- Chain C: H.99, T.133, V.135, K.157, V.159
7 PLIP interactions:7 interactions with chain C- Water bridges: C:T.133, C:T.133, C:T.133, C:T.133, C:K.157
- Salt bridges: C:H.99, C:K.157
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McDonough, M.A. et al., Catalytic Function and Substrate Recognition of the Pectate Lyase from Thermotoga Maritima. To be Published
- Release Date
- 2012-07-11
- Peptides
- PECTATE TRISACCHARIDE-LYASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x ADA- ADA- AQA: 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 3 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McDonough, M.A. et al., Catalytic Function and Substrate Recognition of the Pectate Lyase from Thermotoga Maritima. To be Published
- Release Date
- 2012-07-11
- Peptides
- PECTATE TRISACCHARIDE-LYASE: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A