SMTL ID : 3zug.1

E268D mutant of FAD synthetase from Corynebacterium ammoniagenes

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-hexamer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: H.28, H.31, N.125, S.163, S.164 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.125, A:S.164 Water bridges: A:S.163, A:S.164, A:S.164, A:T.165 Salt bridges: A:H.28, A:H.31 SO4.2: 3 residues within 4Å: Chain A: T.73, L.74 Chain B: Y.279 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.74 SO4.3: 3 residues within 4Å: Chain A: Y.279 Chain B: T.73, L.74 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:L.74, A:Y.279 Water bridges: B:T.216, A:Y.279 SO4.4: 5 residues within 4Å: Chain B: H.28, H.31, N.125, S.163, S.164 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:N.125, B:S.164 Water bridges: B:N.125, B:S.164, B:S.164, B:T.165 Salt bridges: B:H.28, B:H.31 SO4.5: 5 residues within 4Å: Chain C: H.28, H.31, N.125, S.163, S.164 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:N.125, C:S.164 Water bridges: C:S.163, C:S.164, C:S.164, C:T.165 Salt bridges: C:H.28, C:H.31 SO4.6: 3 residues within 4Å: Chain C: T.73, L.74 Chain D: Y.279 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:L.74 SO4.7: 3 residues within 4Å: Chain C: Y.279 Chain D: T.73, L.74 2 PLIP interactions: 1 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:L.74 Water bridges: C:Y.279 SO4.8: 5 residues within 4Å: Chain D: H.28, H.31, N.125, S.163, S.164 8 PLIP interactions: 8 interactions with chain D Hydrogen bonds: D:N.125, D:S.164 Water bridges: D:N.125, D:S.164, D:S.164, D:T.165 Salt bridges: D:H.28, D:H.31 SO4.9: 5 residues within 4Å: Chain E: H.28, H.31, N.125, S.163, S.164 8 PLIP interactions: 8 interactions with chain E Hydrogen bonds: E:N.125, E:S.164 Water bridges: E:S.163, E:S.164, E:S.164, E:T.165 Salt bridges: E:H.28, E:H.31 SO4.10: 3 residues within 4Å: Chain E: T.73, L.74 Chain F: Y.279 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain F Hydrogen bonds: E:L.74, F:Y.279 SO4.11: 3 residues within 4Å: Chain E: Y.279 Chain F: T.73, L.74 3 PLIP interactions: 2 interactions with chain E, 1 interactions with chain F Hydrogen bonds: E:Y.279, F:L.74 Water bridges: E:Y.279 SO4.12: 5 residues within 4Å: Chain F: H.28, H.31, N.125, S.163, S.164 8 PLIP interactions: 8 interactions with chain F Hydrogen bonds: F:N.125, F:S.164 Water bridges: F:N.125, F:S.164, F:S.164, F:T.165 Salt bridges: F:H.28, F:H.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Serrano, A. et al., Key Residues at the Riboflavin Kinase Catalytic Site of the Bifunctional Riboflavin Kinase/Fmn Adenylyltransferase from Corynebacterium Ammoniagenes. Cell Biochem.Biophys. (2013)

Release Date

2012-08-01

Peptides

RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

E
A

F
B

RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF