SMTL ID : 4afa.1

Crystal Structure of subtype-switched Epithelial Adhesin 1 to 2 A domain (Epa1to2A) from Candida glabrata in complex with glycerol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x GLC- GAL: beta-D-galactopyranose-(1-3)-alpha-D-glucopyranose(Non-covalent)

GLC-GAL.1: 10 residues within 4Å: Chain A: W.70, G.109, D.155, D.156, W.189, R.217, D.218, N.219, N.220 Ligands: CA.2 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.155, A:R.217, A:R.217, A:D.218, A:N.219, A:G.109, A:N.219 Water bridges: A:W.189, A:R.217, A:R.217

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: D.155, D.156, N.216, D.218, N.220 Ligands: GLC-GAL.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.155, A:D.156, A:D.218, A:N.220

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain A: I.188, W.189, G.190, R.217 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.217, A:R.217

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 6 residues within 4Å: Chain A: F.227, T.229, N.232, N.234, V.236, Y.242 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.229, A:N.232, A:N.234, A:N.234, A:Y.242 GOL.5: 6 residues within 4Å: Chain A: F.147, H.148, T.149, K.228, T.229, E.230 5 PLIP interactions: 5 interactions with chain A Water bridges: A:K.228, A:K.228, A:K.228, A:K.228, A:T.229 GOL.6: 3 residues within 4Å: Chain A: E.197, L.198, T.199 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maestre-Reyna, M. et al., Structural Basis for Promiscuity and Specificity During Candida Glabrata Invasion of Host Epithelia. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-10-17

Peptides

EPA1P: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EPA1P