SMTL ID : 4z3h.1

Crystal structure of the lectin domain of PapG from E. coli BI47 in complex with 4-methoxyphenyl beta-D-galabiose in space group P21

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x GAL- GLA: alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose(Non-covalent)

GAL-GLA.1: 10 residues within 4Å: Chain A: E.61, S.91, E.93, L.104, K.105, G.106, W.109, R.172, K.174 Ligands: 4KS.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.61, A:E.61, A:L.104, A:G.106, A:K.174, A:K.174 Water bridges: A:G.106, A:E.61, A:K.105

1 x 4KS: 4-methoxyphenol(Non-covalent)

4KS.2: 3 residues within 4Å: Chain A: W.109, R.172 Ligands: GAL-GLA.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Navarra, G. et al., Carbohydrate-Lectin Interactions: An Unexpected Contribution to Affinity. Chembiochem (2017)

Release Date

2016-04-13

Peptides

PapG, lectin domain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PapG, lectin domain

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