SMTL ID : 4a05.1

Structure of the catalytic core domain of the cellobiohydrolase, Cel6A, from Chaetomium thermophilum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: N.55, D.59, W.104, N.113, R.120 No protein-ligand interaction detected (PLIP)

1 x BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC.2: 12 residues within 4Å: Chain A: W.51, D.53, R.54, Y.88, S.100, K.313, P.314, E.317, A.345, G.346, Q.347 Ligands: LI.4 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.54, A:Q.347 Water bridges: A:E.23, A:E.23, A:W.51, A:W.51, A:E.317, A:E.317

1 x BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC-BGC-BGC.3: 17 residues within 4Å: Chain A: D.94, A.97, D.140, T.147, N.148, H.185, G.187, W.188, W.191, A.193, N.194, V.222, N.224, W.282, G.283, W.285 Ligands: LI.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.94, A:V.222, A:N.224 Water bridges: A:D.140, A:N.144

1 x LI: LITHIUM ION(Non-functional Binders)

LI.4: 2 residues within 4Å: Ligands: BGC-BGC.2, BGC-BGC-BGC-BGC.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thompson, A.J. et al., Structure of the Catalytic Core Module of the Chaetomium Thermophilum Family Gh6 Cellobiohydrolase Cel6A. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-07-25

Peptides

CELLOBIOHYDROLASE FAMILY 6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CELLOBIOHYDROLASE FAMILY 6