SMTL ID : 4a20.1

Crystal structure of the Ubl domain of Mdy2 (Get5) at 1.78A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: H.73, D.74 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.74 Salt bridges: A:K.48, A:H.73 SO4.2: 2 residues within 4Å: Chain A: Q.28, A.29 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.28, A:A.29 Salt bridges: B:K.64 SO4.3: 3 residues within 4Å: Chain A: K.70, V.71 Chain B: K.25 4 PLIP interactions: 2 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:V.71 Salt bridges: A:K.70, B:K.25, B:K.31 SO4.4: 2 residues within 4Å: Chain B: H.73, D.74 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.74 Salt bridges: B:K.48, B:H.73 SO4.5: 2 residues within 4Å: Chain B: Q.28, A.29 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:Q.28, B:A.29 Salt bridges: A:K.64 SO4.6: 3 residues within 4Å: Chain A: K.25 Chain B: K.70, V.71 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:V.71 Salt bridges: B:K.70, A:K.25, A:K.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simon, A.C. et al., Structure of the Sgt2/Get5 Complex Provides Insights Into Get-Mediated Targeting of Tail-Anchored Membrane Proteins. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2012-11-14

Peptides

UBIQUITIN-LIKE PROTEIN MDY2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

UBIQUITIN-LIKE PROTEIN MDY2