SMTL ID : 4a29.1

Structure of the engineered retro-aldolase RA95.0

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x 3NK: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE(Covalent)

3NK.1: 16 residues within 4Å: Chain A: W.8, E.53, S.56, P.57, S.58, F.89, S.110, F.112, L.131, M.180, R.182, D.183, F.184, G.187, K.210 Ligands: MLT.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.8, A:R.182, A:F.184, A:K.210 Hydrogen bonds: A:W.8 pi-Cation interactions: A:R.182, A:R.182

1 x MLT: D-MALATE(Non-covalent)

MLT.2: 11 residues within 4Å: Chain A: E.53, S.56, S.58, F.89, R.182, K.210, L.211, G.212, S.233, S.234 Ligands: 3NK.1 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.58, A:S.233, A:S.233, A:S.234 Water bridges: A:E.53, A:R.182, A:G.212, A:I.213, A:S.234 Salt bridges: A:R.182, A:K.210

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Giger, L. et al., Evolution of a designed retro-aldolase leads to complete active site remodeling. Nat.Chem.Biol. (2013)

Release Date

2012-11-07

Peptides

ENGINEERED RETRO-ALDOL ENZYME RA95.0: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ENGINEERED RETRO-ALDOL ENZYME RA95.0