SMTL ID : 4a2s.1

Structure of the engineered retro-aldolase RA95.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

2 x 3NK: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE(Covalent)

3NK.1: 19 residues within 4Å: Chain A: L.9, Y.51, S.56, K.83, F.89, S.110, F.112, L.131, I.133, K.135, L.159, N.161, D.165, F.180, M.182, F.184, K.210, S.233 Ligands: 3NK.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.51, A:K.83, A:F.112, A:I.133, A:L.159, A:L.159, A:F.180, A:F.180, A:M.182, A:F.184 Water bridges: A:S.110 3NK.2: 13 residues within 4Å: Chain A: W.8, P.57, S.58, F.89, F.180, M.182, F.184, G.187, I.189, K.210, L.211, G.212 Ligands: 3NK.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.8, A:P.57, A:K.210, A:K.210 Hydrogen bonds: A:W.8 pi-Stacking: A:F.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Giger, L. et al., Evolution of a designed retro-aldolase leads to complete active site remodeling. Nat.Chem.Biol. (2013)

Release Date

2012-11-07

Peptides

INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE