SMTL ID : 4a2v.1

STRUCTURE OF DUCK RIG-I C-TERMINAL DOMAIN (CTD)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.10, C.13, C.64, C.69 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.10, A:C.13, A:C.64, A:C.69

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: K.39, F.82, D.83, N.84, L.85, P.86, M.124, Y.128 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.39 Water bridges: A:E.36, A:D.83, A:Y.128 GOL.3: 3 residues within 4Å: Chain A: S.29, H.30, V.87 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.30 Water bridges: A:S.29, A:S.29, A:H.31, A:H.31

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kowalinski, E. et al., Structural Basis for the Activation of Innate Immune Pattern Recognition Receptor Rig-I by Viral RNA. Cell(Cambridge,Mass.) (2011)

Release Date

2011-10-19

Peptides

RETINOIC ACID INDUCIBLE PROTEIN I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RETINOIC ACID INDUCIBLE PROTEIN I

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