SMTL ID : 4a41.1

CpGH89CBM32-5, from Clostridium perfringens, in complex with galactose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: F.49, D.52, K.54, T.57, A.155, E.156 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:F.49, A:K.54, A:T.57, A:T.57, A:A.155

1 x GAL: beta-D-galactopyranose(Non-covalent)

GAL.2: 6 residues within 4Å: Chain A: E.44, H.60, Y.63, R.91, N.96, F.151 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.60, A:R.91, A:R.91, A:N.96 Water bridges: A:E.44, A:E.44

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 1 residues within 4Å: Chain A: K.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.136, A:K.136 NA.4: 1 residues within 4Å: Chain A: N.133 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.133 Water bridges: A:N.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ficko-Blean, E. et al., Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens. Plos One (2012)

Release Date

2012-04-04

Peptides

ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN

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