SMTL ID : 4a61.1

ParM from plasmid R1 in complex with AMPPNP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 20 residues within 4Å: Chain A: G.14, S.15, T.16, N.17, K.19, G.178, G.179, T.180, T.181, V.205, I.232, I.233, R.235, G.286, G.287, G.288, E.290, L.291, Q.314 Ligands: MG.2 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:G.14, A:S.15, A:S.15, A:T.16, A:T.16, A:N.17, A:K.19, A:G.179, A:T.180, A:T.180, A:T.181, A:T.181, A:G.287 Water bridges: A:D.12, A:N.17, A:E.154, A:G.178, A:T.181, A:T.209, A:Q.314 Salt bridges: A:K.19 ANP.3: 20 residues within 4Å: Chain B: G.14, S.15, T.16, N.17, K.19, G.178, G.179, T.180, T.181, V.205, I.232, I.233, R.235, G.286, G.287, G.288, E.290, L.291, Q.314 Ligands: MG.4 22 PLIP interactions: 22 interactions with chain B Hydrogen bonds: B:G.14, B:S.15, B:S.15, B:T.16, B:T.16, B:N.17, B:K.19, B:G.179, B:T.180, B:T.180, B:T.181, B:T.181, B:G.287, B:E.290 Water bridges: B:D.12, B:N.17, B:E.154, B:G.178, B:T.181, B:T.209, B:Q.314 Salt bridges: B:K.19

2 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 2 residues within 4Å: Chain A: K.19 Ligands: ANP.1 No protein-ligand interaction detected (PLIP) MG.4: 2 residues within 4Å: Chain B: K.19 Ligands: ANP.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gayathri, P. et al., A Bipolar Spindle of Antiparallel Parm Filaments Drives Bacterial Plasmid Segregation. Science (2012)

Release Date

2012-11-07

Peptides

PLASMID SEGREGATION PROTEIN PARM: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

PLASMID SEGREGATION PROTEIN PARM