SMTL ID : 4a78.1

cytochrome c peroxidase M119W in complex with guiacol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 21 residues within 4Å: Chain A: P.46, R.50, W.53, P.147, D.148, A.149, F.160, L.173, M.174, A.176, H.177, G.180, K.181, T.182, H.183, N.186, S.187, W.193, L.234, T.236, F.264 24 PLIP interactions: 24 interactions with chain A, Hydrophobic interactions: A:R.50, A:W.53, A:W.53, A:W.53, A:P.147, A:A.149, A:F.160, A:L.173, A:L.173, A:A.176, A:T.182, A:L.234, A:F.264 Hydrogen bonds: A:K.181, A:H.183, A:N.186 Water bridges: A:R.50, A:A.85 Salt bridges: A:R.50, A:H.183, A:H.183 pi-Stacking: A:W.53 pi-Cation interactions: A:R.50 Metal complexes: A:H.177

1 x JZ3: Guaiacol(Non-covalent)

JZ3.2: 8 residues within 4Å: Chain A: R.74, F.91, L.94, E.95, H.98, S.106, L.109, F.110 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.94, A:H.98, A:L.109, A:F.110 Water bridges: A:E.95, A:E.95 pi-Stacking: A:F.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murphy, E.J. et al., Crystal Structure of Guaiacol and Phenol Bound to a Heme Peroxidase. FEBS J. (2012)

Release Date

2012-11-07

Peptides

CYTOCHROME C PEROXIDASE, MITOCHONDRIAL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME C PEROXIDASE, MITOCHONDRIAL