SMTL ID : 4a7m.1

cytochrome c peroxidase S81W mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 23 residues within 4Å: Chain A: P.46, V.47, V.49, R.50, W.53, P.147, D.148, A.149, F.160, L.173, M.174, A.176, H.177, L.179, G.180, K.181, T.182, H.183, N.186, S.187, W.193, L.234, T.236 28 PLIP interactions: 27 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:V.49, A:W.53, A:W.53, A:W.53, A:P.147, A:A.149, A:F.160, A:L.173, A:L.173, A:A.176, A:L.179, A:T.182, A:W.193 Hydrogen bonds: A:K.181, A:H.183, A:N.186, A:S.187 Water bridges: A:Y.38, A:V.47, A:R.50, A:R.50, A:H.183 Salt bridges: A:H.183, A:H.183 pi-Stacking: A:W.53 pi-Cation interactions: A:R.50 Metal complexes: A:H.177, H2O.7

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.2: 3 residues within 4Å: Chain A: K.61, H.62, Q.161 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Q.161 Water bridges: A:Q.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murphy, E.J. et al., Crystal Structure of Guaiacol and Phenol Bound to a Heme Peroxidase. FEBS J. (2012)

Release Date

2012-11-07

Peptides

CYTOCHROME C PEROXIDASE, MITOCHONDRIAL: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CYTOCHROME C PEROXIDASE, MITOCHONDRIAL