SMTL ID : 4ab4.1 (1 other biounit)

Structure of Xenobiotic Reductase B from Pseudomonas putida in complex with TNT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 21 residues within 4Å: Chain A: A.22, P.23, L.24, T.25, R.26, A.56, Q.98, H.173, N.176, H.225, R.262, N.285, E.286, R.287, F.307, G.308, V.309, I.312, F.335, Y.336 Ligands: TNL.7 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.24, A:V.309, A:F.335, A:Y.336 Hydrogen bonds: A:P.23, A:T.25, A:A.56, A:Q.98, A:Q.98, A:N.176, A:N.285, A:R.287, A:G.308, A:V.309 Water bridges: A:T.25, A:T.25, A:H.225, A:H.225, A:N.285, A:E.286, A:E.286

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.33 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.33, A:R.33, A:Y.110 Salt bridges: A:R.33 SO4.3: 3 residues within 4Å: Chain A: T.85, K.86, H.89 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.85 Water bridges: A:H.89, A:H.89, A:A.90 Salt bridges: A:H.89

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 8 residues within 4Å: Chain A: E.263, R.264, E.265, S.269, G.271, P.272, F.288, K.301 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.263, A:E.263, A:E.265, A:S.269 Water bridges: A:E.263, A:G.271 GOL.5: 6 residues within 4Å: Chain A: G.252, G.255, I.256, F.278, G.279, G.280 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.256, A:F.278 Water bridges: A:G.255 GOL.6: 5 residues within 4Å: Chain A: S.186, G.197, S.198, L.199, R.202 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.197, A:S.198, A:L.199, A:R.202

1 x TNL: 2,4,6-TRINITROTOLUENE(Non-covalent)

TNL.7: 7 residues within 4Å: Chain A: H.173, N.176, Y.178, A.232, H.233, R.262 Ligands: FMN.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.232 Water bridges: A:Y.66, A:Y.336

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Carvalho, A.L. et al., Structural Determinants of Aromatic Ring Reduction in the Xenobiotic Reductase B from Pseudomonas Putida. To be Published

Release Date

2012-12-19

Peptides

XENOBIOTIC REDUCTASE B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

XENOBIOTIC REDUCTASE B

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