This entry has been superseded by
6TAV
on April 13, 2022, midnight.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 4.30 Å
- Oligo State
- homo-tetramer
- Ligands
- 12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
NAG-NAG-MAN.4: 3 residues within 4Å:- Chain A: N.968, E.969, Q.971
No protein-ligand interaction detected (PLIP)NAG-NAG-MAN.8: 3 residues within 4Å:- Chain B: N.968, E.969, Q.971
No protein-ligand interaction detected (PLIP)NAG-NAG-MAN.12: 3 residues within 4Å:- Chain C: N.968, E.969, Q.971
No protein-ligand interaction detected (PLIP)NAG-NAG-MAN.16: 3 residues within 4Å:- Chain D: N.968, E.969, Q.971
No protein-ligand interaction detected (PLIP)- 13 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.17: 2 residues within 4Å:- Chain A: N.47, S.49
No protein-ligand interaction detected (PLIP)NAG.18: 2 residues within 4Å:- Chain A: N.224, Q.280
No protein-ligand interaction detected (PLIP)NAG.19: 2 residues within 4Å:- Chain A: Y.371, N.373
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Y.371
NAG.20: 3 residues within 4Å:- Chain B: N.47, S.49
- Chain C: T.1094
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:T.1094, C:T.1094
NAG.21: 2 residues within 4Å:- Chain B: N.224, Q.280
No protein-ligand interaction detected (PLIP)NAG.22: 2 residues within 4Å:- Chain B: Y.371, N.373
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:Y.371
NAG.23: 3 residues within 4Å:- Chain B: T.1094
- Chain C: N.47, S.49
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:T.1094
NAG.24: 2 residues within 4Å:- Chain C: N.224, Q.280
No protein-ligand interaction detected (PLIP)NAG.25: 2 residues within 4Å:- Chain C: Y.371, N.373
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:Y.371
NAG.26: 2 residues within 4Å:- Chain C: R.1350, N.1401
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:R.1350
NAG.27: 2 residues within 4Å:- Chain D: N.47, S.49
No protein-ligand interaction detected (PLIP)NAG.28: 2 residues within 4Å:- Chain D: N.224, Q.280
No protein-ligand interaction detected (PLIP)NAG.29: 2 residues within 4Å:- Chain D: Y.371, N.373
1 PLIP interactions:1 interactions with chain D- Hydrogen bonds: D:Y.371
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Marrero, A. et al., The crystal structure of human alpha 2-macroglobulin reveals a unique molecular cage. Angew. Chem. Int. Ed. Engl. (2012)
- Release Date
- 2012-02-22
- Peptides
- ALPHA-2-MACROGLOBULIN: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D