SMTL ID : 4acy.2 (1 other biounit)

Selenomethionine derivative of the GH99 endo-alpha-mannosidase from Bacteroides thetaiotaomicron

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: W.49, H.61, H.64, H.331 Ligands: GOL.3 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.61 Water bridges: A:H.64, A:R.291, A:R.291 GOL.2: 2 residues within 4Å: Chain A: A.69, H.72 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.72 GOL.3: 4 residues within 4Å: Chain A: W.49, H.61, W.125 Ligands: GOL.1 2 PLIP interactions: 2 interactions with chain A Water bridges: A:H.61, A:H.64 GOL.4: 5 residues within 4Å: Chain A: K.60, H.61, M.63, H.64, P.65 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.61, A:H.61, A:H.64

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.5: 5 residues within 4Å: Chain A: Y.47, H.152, E.154, Y.193, Y.248 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.47, A:H.152

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thompson, A.J. et al., Structural and Mechanistic Insight Into N-Glycan Processing by Endo-Alpha-Mannosidase. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-02-01

Peptides

ENDO-ALPHA-MANNOSIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

ENDO-ALPHA-MANNOSIDASE

Related Entries With Identical Sequence