SMTL ID : 4afi.1

Complex between Vamp7 longin domain and fragment of delta-adaptin from AP3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

2 x PR: PRASEODYMIUM ION(Non-covalent)

PR.1: 6 residues within 4Å: Chain A: K.49, N.102, D.120, D.121, D.122 Chain B: D.45 5 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:D.120, A:D.121, A:D.122, B:D.45, H2O.1 PR.2: 4 residues within 4Å: Chain B: E.52, D.120, D.121, D.122 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:E.52, B:D.121, B:D.122, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kent, H.M. et al., Structural Basis of the Intracellular Sorting of the Snare Vamp7 by the Ap3 Adaptor Complex. Dev.Cell (2012)

Release Date

2012-05-30

Peptides

AP-3 COMPLEX SUBUNIT DELTA-1, VESICLE-ASSOCIATED MEMBRANE PROTEIN 7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

AP-3 COMPLEX SUBUNIT DELTA-1, VESICLE-ASSOCIATED MEMBRANE PROTEIN 7