- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NAG- FUC: alpha-L-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 8 x FUC: alpha-L-fucopyranose(Non-covalent)
FUC.5: 6 residues within 4Å:- Chain A: R.25, E.37, L.69, I.72, Y.88, W.94
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:L.69, A:I.72, A:Y.88
- Hydrogen bonds: A:R.25, A:E.37
- Water bridges: A:E.37, A:E.37, A:E.37, A:E.37, A:W.94
- Salt bridges: A:R.25
FUC.6: 7 residues within 4Å:- Chain A: R.126, E.138, M.140, T.150, I.176, Y.192, W.198
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:I.176, A:Y.192
- Hydrogen bonds: A:E.138, A:T.150, A:T.150, A:T.150
- Salt bridges: A:R.126
FUC.7: 6 residues within 4Å:- Chain A: Y.168, R.177, Q.189, I.227, M.229, W.245
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:I.227, A:W.245
- Hydrogen bonds: A:Y.168, A:Q.189, A:Q.189
- Water bridges: A:Y.199, A:Y.199
- Salt bridges: A:R.177
FUC.8: 6 residues within 4Å:- Chain A: R.230, Q.242, F.274, P.279, L.281, W.299
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:F.274, A:P.279, A:L.281, A:W.299
- Hydrogen bonds: A:R.230, A:Q.242, A:Q.242
- Water bridges: A:W.299
- Salt bridges: A:R.230
FUC.9: 6 residues within 4Å:- Chain A: N.22, L.24, Y.40, W.44, R.282, E.296
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:N.22, A:L.24, A:Y.40
- Hydrogen bonds: A:R.282, A:E.296
- Water bridges: A:W.44, A:E.296
- Salt bridges: A:R.282
FUC.10: 8 residues within 4Å:- Chain B: L.117, R.126, E.138, M.140, T.150, I.176, Y.192, W.198
7 PLIP interactions:7 interactions with chain B- Hydrophobic interactions: B:L.117, B:I.176, B:Y.192
- Hydrogen bonds: B:E.138, B:T.150, B:T.150
- Salt bridges: B:R.126
FUC.11: 6 residues within 4Å:- Chain B: R.230, Q.242, F.274, P.279, L.281, W.299
9 PLIP interactions:9 interactions with chain B- Hydrophobic interactions: B:F.274, B:P.279, B:L.281, B:W.299
- Hydrogen bonds: B:R.230, B:Q.242, B:Q.242
- Water bridges: B:W.299
- Salt bridges: B:R.230
FUC.12: 6 residues within 4Å:- Chain B: N.22, L.24, Y.40, W.44, R.282, E.296
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:N.22, B:Y.40
- Hydrogen bonds: B:R.282, B:E.296
- Water bridges: B:W.44
- Salt bridges: B:R.282
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Houser, J. et al., Structural Insights Into Aspergillus Fumigatus Lectin Specificity: Afl Binding Sites are Functionally Non-Equivalent. Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2013-02-20
- Peptides
- Fucose-specific lectin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x NAG- FUC: alpha-L-fucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
- 8 x FUC: alpha-L-fucopyranose(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Houser, J. et al., Structural Insights Into Aspergillus Fumigatus Lectin Specificity: Afl Binding Sites are Functionally Non-Equivalent. Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2013-02-20
- Peptides
- Fucose-specific lectin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B