SMTL ID : 4ajf.1

Identification and structural characterization of PDE10 fragment inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.83, H.117, D.118, D.228 Ligands: MG.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.83, A:H.117, A:D.118, A:D.228, H2O.3, H2O.4 ZN.4: 5 residues within 4Å: Chain B: H.83, H.117, D.118, D.228 Ligands: MG.5 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.83, B:H.117, B:D.118, B:D.228, H2O.11, H2O.11

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.118 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.118, H2O.3, H2O.3, H2O.4, H2O.4, H2O.4 MG.5: 3 residues within 4Å: Chain B: D.118, E.146 Ligands: ZN.4 6 PLIP interactions: 1 interactions with chain B, 5 Ligand-Water interactions Metal complexes: B:D.118, H2O.11, H2O.11, H2O.11, H2O.11, H2O.12

1 x F03: N-(4-OXO-3H-QUINAZOLIN-2-YL)ACETAMIDE(Non-covalent)

F03.3: 10 residues within 4Å: Chain A: Y.78, L.189, L.229, V.232, I.246, Y.247, M.267, G.279, Q.280, F.283 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.229, A:V.232, A:I.246 Hydrogen bonds: A:Q.280, A:Q.280 pi-Stacking: A:F.283

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johansson, P. et al., Identification and Structural Characterization of Pde10 Fragment Inhibitors. To be Published

Release Date

2013-03-06

Peptides

CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC PHOSPHODIESTERASE 10A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

CAMP AND CAMP-INHIBITED CGMP 3', 5'-CYCLIC PHOSPHODIESTERASE 10A

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