SMTL ID : 4ako.1

Mutations in the neighbourhood of CotA-laccase trinuclear site: E498L mutant

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

4 x CU: COPPER (II) ION(Non-covalent)

CU.1: 5 residues within 4Å: Chain A: H.419, C.492, I.494, H.497, M.502 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.419, A:C.492, A:H.497 CU.2: 5 residues within 4Å: Chain A: H.107, W.151, H.153, H.493 Ligands: OXY.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.107, A:H.153, A:H.493 CU.3: 7 residues within 4Å: Chain A: H.155, H.422, H.424, V.489, H.491 Ligands: CU.4, OXY.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.155, A:H.424, A:H.491 CU.4: 6 residues within 4Å: Chain A: H.105, H.107, H.422, H.424 Ligands: CU.3, OXY.5 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.105, A:H.422, H2O.8

1 x OXY: OXYGEN MOLECULE(Non-covalent)

OXY.5: 11 residues within 4Å: Chain A: H.105, H.107, H.153, H.155, H.422, H.424, H.491, H.493 Ligands: CU.2, CU.3, CU.4 No protein-ligand interaction detected (PLIP)

20 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 5 residues within 4Å: Chain A: D.113, D.114, Y.133, K.135, R.487 Ligand excluded by PLIP EDO.7: 4 residues within 4Å: Chain A: T.307, A.308, Y.309, E.310 Ligand excluded by PLIP EDO.8: 7 residues within 4Å: Chain A: N.74, L.76, P.77, S.78, V.100, S.124, K.125 Ligand excluded by PLIP EDO.9: 5 residues within 4Å: Chain A: I.12, E.188, E.244, Y.250, K.341 Ligand excluded by PLIP EDO.10: 3 residues within 4Å: Chain A: R.136, E.137, V.138 Ligand excluded by PLIP EDO.11: 5 residues within 4Å: Chain A: F.292, S.293, Y.300, P.457, S.459 Ligand excluded by PLIP EDO.12: 5 residues within 4Å: Chain A: E.61, I.173, H.175, D.190, P.192 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain A: D.268, I.315, A.317, P.328, A.332, N.333 Ligand excluded by PLIP EDO.14: 7 residues within 4Å: Chain A: K.183, L.184, P.185, S.186, E.348, S.349 Ligands: EDO.25 Ligand excluded by PLIP EDO.15: 3 residues within 4Å: Chain A: L.3, L.43, I.200 Ligand excluded by PLIP EDO.16: 6 residues within 4Å: Chain A: Q.362, T.406, R.429, W.463, A.478, T.480 Ligand excluded by PLIP EDO.17: 2 residues within 4Å: Chain A: H.37, Q.38 Ligand excluded by PLIP EDO.18: 3 residues within 4Å: Chain A: T.130, G.131, F.134 Ligand excluded by PLIP EDO.19: 1 residues within 4Å: Chain A: N.390 Ligand excluded by PLIP EDO.20: 2 residues within 4Å: Chain A: Q.367, K.402 Ligand excluded by PLIP EDO.21: 2 residues within 4Å: Chain A: R.64, R.146 Ligand excluded by PLIP EDO.22: 8 residues within 4Å: Chain A: L.267, N.269, G.271, D.272, I.304, D.305, Y.309, I.314 Ligand excluded by PLIP EDO.23: 3 residues within 4Å: Chain A: Y.354, L.355, A.356 Ligand excluded by PLIP EDO.24: 6 residues within 4Å: Chain A: F.81, L.82, P.83, L.206, F.207, Y.208 Ligand excluded by PLIP EDO.25: 6 residues within 4Å: Chain A: S.186, D.187, Y.189, R.248, Q.345 Ligands: EDO.14 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, Z. et al., The Role of Glu498 in the Dioxygen Reactivity of Cota-Laccase from Bacillus Subtilis. Dalton Trans (2010)

Release Date

2012-03-14

Peptides

SPORE COAT PROTEIN A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SPORE COAT PROTEIN A