SMTL ID : 4an4.2 (1 other biounit)

Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

1 x DUD: DEOXYURIDINE-5'-DIPHOSPHATE(Non-covalent)

DUD.1: 14 residues within 4Å: Chain B: S.34, N.222, G.245, S.246, T.274, W.295, I.296, P.297, L.298, H.311, G.313, S.314, G.315, T.316 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:L.298 Hydrogen bonds: B:S.34, B:N.222, B:S.246, B:I.247, B:T.274, B:I.296, B:I.296, B:L.298, B:G.315, B:T.316, B:T.316, B:T.316 Salt bridges: B:H.311, B:H.311 pi-Stacking: B:W.295

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Claesson, M. et al., Crystal Structure of the Glycosyltransferase Snogd from the Biosynthetic Pathway of the Nogalamycin in Streptomyces Nogalater. FEBS J. (2012)

Release Date

2012-09-05

Peptides

GLYCOSYL TRANSFERASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

GLYCOSYL TRANSFERASE

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