SMTL ID : 4ane.1

R80N MUTANT OF NUCLEOSIDE DIPHOSPHATE KINASE FROM MYCOBACTERIUM TUBERCULOSIS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-hexamer

Ligands

3 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 6 residues within 4Å: Chain A: K.10, R.86, T.92, R.104, N.114, H.117 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:N.114 Water bridges: A:K.10, A:Y.50, A:H.53, A:R.104, A:G.118 Salt bridges: A:K.10, A:R.86, A:R.86, A:R.104, A:R.104, A:H.117, A:H.117 CIT.2: 6 residues within 4Å: Chain D: K.10, R.86, T.92, R.104, N.114, H.117 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:T.92, D:N.114, D:H.117 Water bridges: D:K.10, D:T.92, D:R.104, D:G.118 Salt bridges: D:K.10, D:R.86, D:R.86, D:R.104, D:R.104, D:H.117 CIT.3: 7 residues within 4Å: Chain F: K.10, Y.50, R.86, T.92, R.104, N.114, H.117 15 PLIP interactions: 15 interactions with chain F Hydrogen bonds: F:N.114, F:H.117 Water bridges: F:K.10, F:R.86, F:R.104, F:G.118, F:D.120, F:D.120 Salt bridges: F:K.10, F:K.10, F:R.86, F:R.86, F:R.104, F:R.104, F:H.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Georgescauld, F. et al., Structure of Mycobacterium Tuberculosis Nucleoside Diphosphate Kinase R80N Mutant in Complex with Citrate. Acta Crystallogr.,Sect.D (2014)

Release Date

2013-03-13

Peptides

NUCLEOSIDE DIPHOSPHATE KINASE: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

NUCLEOSIDE DIPHOSPHATE KINASE