- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 2 x A1Q: methyl L-glycero-alpha-D-manno-heptopyranoside(Non-covalent)
A1Q.3: 14 residues within 4Å:- Chain A: N.29, A.30, A.31, E.32, Q.34, E.110, D.111, H.113, D.114, D.116, D.119
- Chain B: G.129
- Ligands: CA.1, CA.2
5 PLIP interactions:1 interactions with chain B, 4 interactions with chain A- Hydrogen bonds: B:G.129, A:A.31, A:E.32, A:Q.34, A:D.119
A1Q.9: 13 residues within 4Å:- Chain A: G.129
- Chain B: N.29, A.30, A.31, E.32, E.110, D.111, H.113, D.114, D.116, D.119
- Ligands: CA.7, CA.8
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:A.31, B:E.32, B:Q.34, B:D.111, B:D.114, B:D.119, A:G.129
- Salt bridges: B:H.113
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 3 residues within 4Å:- Chain A: H.50, K.51, R.59
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.51
- Salt bridges: A:H.50, A:R.59
SO4.5: 6 residues within 4Å:- Chain A: R.86, L.87, A.88, P.89
- Chain B: R.86
- Ligands: SO4.6
3 PLIP interactions:2 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:L.87
- Salt bridges: A:R.86, B:R.86
SO4.6: 5 residues within 4Å:- Chain A: R.86
- Chain B: R.86, L.87, P.89
- Ligands: SO4.5
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain B- Salt bridges: A:R.86, B:R.86
SO4.10: 3 residues within 4Å:- Chain B: E.13, K.69, R.71
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.13
- Salt bridges: B:K.69, B:R.71
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Marchetti, R. et al., Burkholderia Cenocepacia Lectin a Binding to Heptoses from the Bacterial Lipopolysaccharide. Glycobiology (2012)
- Release Date
- 2012-08-15
- Peptides
- BC2L-A LECTIN: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
E
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.70 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 2 x A1Q: methyl L-glycero-alpha-D-manno-heptopyranoside(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Marchetti, R. et al., Burkholderia Cenocepacia Lectin a Binding to Heptoses from the Bacterial Lipopolysaccharide. Glycobiology (2012)
- Release Date
- 2012-08-15
- Peptides
- BC2L-A LECTIN: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
E