SMTL ID : 4ap0.1 (3 other biounits)

The mitotic kinesin Eg5 in complex with Mg-ADP and ispinesib

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: T.114, S.234 Ligands: ADP.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:T.114, H2O.1, H2O.1, H2O.1

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 13 residues within 4Å: Chain A: R.26, R.28, P.29, Q.108, T.109, G.110, T.111, G.112, K.113, T.114, F.115, E.120 Ligands: MG.1 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:R.26, A:G.110, A:T.111, A:T.111, A:G.112, A:K.113, A:T.114, A:T.114, A:T.114, A:F.115, A:E.120 Salt bridges: A:K.113 pi-Stacking: A:F.115, A:F.115

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: N.31, L.32 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: T.78, Q.80, F.115 Ligand excluded by PLIP

1 x G7X: ISPINESIB MESILATE(Non-covalent)

G7X.5: 17 residues within 4Å: Chain A: E.118, G.119, E.120, R.121, W.129, D.132, I.138, P.139, L.162, L.173, V.212, Y.213, L.216, E.217, G.219, A.220, R.223 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:E.118, A:R.121, A:W.129, A:D.132, A:P.139, A:L.162, A:V.212, A:Y.213, A:L.216, A:L.216, A:L.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talapatra, S.K. et al., The Structure of the Ternary Eg5-Adp-Ispinesib Complex. Acta Crystallogr.,Sect.D (2012)

Release Date

2012-09-26

Peptides

KINESIN-LIKE PROTEIN KIF11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

KINESIN-LIKE PROTEIN KIF11

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