SMTL ID : 4ap5.1

Crystal structure of human POFUT2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: L.167, N.168 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.168 NAG.2: 2 residues within 4Å: Chain A: N.238, A.243 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.238 NAG.4: 3 residues within 4Å: Chain A: I.278 Chain B: N.168, S.170 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain B: N.238, A.243 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: R.67, Q.78, D.343, G.344 Ligand excluded by PLIP

1 x MG: MAGNESIUM ION(Non-covalent)

MG.6: 1 residues within 4Å: Chain B: E.289 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, C.I. et al., Structure of Human Pofut2: Insights Into Thrombospondin Type 1 Repeat Fold and O-Fucosylation. Embo J. (2012)

Release Date

2012-08-08

Peptides

GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2